Team

Ayellet Segrè, Ph.D. 

Principal Investigator

Assistant Professor of Ophthalmology, Harvard Medical School

Assistant Scientist, Ocular Genomics Institute, Massachusetts Eye and Ear (MEE)  

Co-Director, Biostatistics and Bioinformatics Core, MEE

Associate Member, Broad Institute of Harvard and MIT

Member of the Genotype-Tissue Expression (GTEx) Project Consortium

E-mail: ayellet_segre [at] meei.harvard.edu

Katherine Duchinski

Ph.D. student in the Bioinformatics and Integrative Genomics (BIG) Program, Harvard Medical School

B.S., Biology and Data Sciences, College Of Charleston, Charleston, SC

Katherine is interested in integrating human genetics, functional genomics, and small molecule perturbational expression profiles to identify new drug repurposing opportunities for complex eye diseases, such as glaucoma and age-related macular degeneration.

Puja Mehta, M.Sc.

Bioinformaticist

M.Sc., Bioinformatics, Northeastern University, Boston, MA

B.S., Biotechnology, Dayananda Sagar College of Engineering, Bengaluru, India

Puja is interested in using splicing QTLs in human retina to identify novel regulatory mechanisms that lead to age-related macular degeneration, and in integrating functional genomic and single cell data with GWAS to shed light on the causal mechanisms of eye disease.

Yuyang (Leo) Luo, Ph.D.

Bioinformaticist


Ph.D., Biomedical Engineering, Rutgers University, Newark, NJ

M.Sc., Electronic and information Engineering, Stevens Institute of Technology, Hoboken, NJ

B.S., Electronic and information Engineering, Wuhan University of Science and Technology, China

Co-advised with Dr. Elizabeth Rossin and Prof. Janey Wiggs, Mass. Eye and Ear, HMS

Songtao Xu, M.Sc.

Bioinformaticist; Previously MSc intern student

M.Sc. student in Biomedical Informatics Program, Harvard Medical School

B.A. in Computational Biology; Mathematical Sciences: Statistics, Colby College, Waterville, ME

Levi Svaren, B.Sc.

Master's student in Data Science

B.Sc. in Biochemistry and Molecular Biology; University of Wisconsin - Eau Claire

Mauricio Garcia, B.Sc.

Medical student at Harvard and MIT Health, Sciences and Technology (HST) MD program; jointly advised with Dr. Janey Wiggs

B.Sc. in Molecular and Cellular Biology, Harvard College

Rinaldo Catta-Preta, Ph.D

Postdoctoral research fellow

Ph.D., Integrative Genetics and Genomics, University of California Davis

B.S., Chemistry with emphasis in Biochemistry and Molecular Biology, Universidade de Sao Paulo, Brazil


Michelle Bartolo, M.Sc., Ph.D.

Postdoctoral research fellow

Ph.D., Biomathematics, NC State (North Carolina State University) 

M.Sc., Applied Mathematics, NC State University

B.S., Applied Mathematics, Marist College Biology and Computer Science 

Jyoti Lama, Ph.D.

Bioinformaticist, jointly advised with Dr. Lucia Sobrin

Ph.D., Biology, University of Houston

B.Tech. in Biotechnology, Kathmandu University, Nepal 

Meghana Dutta, M.Sc.

Bioinformaticst, jointly advised with Dr. Janey Wiggs

M.Sc. in Bioinformatics, Johns Hopkins University

PharmD, Jawaharlal Nehru Technological University, India

Tofi Soneye

Undergraduate student intern

B.Sc., Biochemistry/Molecular Biology and Data Science at Fisk University (Junior)

Susan Xu

Undergraduate student intern

B.Sc. in Neuroscience and minor in Computer Science at Reed College (Senior)

Alumni

Alumni: Andrew Hamel, M.Sc. 

Bioinformatics Analyst, NBACC, Battelle National Biodefense Institute

M.Sc., Bioinformatics Program at Boston University

B.A., Biochemistry and Molecular Biology; Minor in Mathematics, The College of Wooster, Wooster, Ohio

Alumni: John Rouhana, M.Sc.

Senior Scientist at Gritstone Oncology

M.Sc., Bioinformatics, Northeastern University, Boston, MA

B.Sc., Premedical and Health Studies, MCPHS University, Boston, MA

Alumni: Jiali Wang, M.Sc., Ph.D.

Senior Principal Biostatistician at Novartis

Ph.D., Statistics, Australian National University, Australia

M.Sc.., Statistics, Australian National University, Australia

B.S., Mathematics, Capital Normal University, China 

Jacqueline Ohmura, Ph.D., M.D.  

Radiology Residency at Harvard Medical School

M.D., Harvard and MIT Health, Sciences and Technology (HST) MD Program

Ph.D., Biological Engineering, MIT

B.S., Materials Engineering, Ohio State University, Columbus, OH

Co-mentored with Prof. Janey Wiggs, Mass. Eye and Ear, HMS

Jackie is using soft clustering analysis (non-negative matrix factorization) across genetic associations of known glaucoma loci with multiple endophenotypes of primary open angle glaucoma to identify pathogenic mechanisms and biological subtypes of glaucoma.

Alumni: Arushi Shrivastava, M.Sc.

Senior Data Scientist, Bioinformatician, Johnson & Johnson Innovative Medicine 

M.Sc. in Bioinformatics Program at Boston University

B.S. in Biotechnology, JECRC University, Jaipur, Rajasthan, India

Alumni: Ashwathy Nair, M.Sc.

Bioinformaticist

M.Sc., Bioinformatics, Northeastern University, Boston, MA

B.E in Biotechnology, SIES Graduate School of Technology, Mumbai, India